Imperfect Nature

This note is about the mess, imperfections, inefficiencies, cruelties, redundancy, etc. in natural systems.

Cf.

Living systems change through the accretion of ‘add-ons’. They become more complicated. This can lead to redundancy:

  • components have overlapping functions
  • parts are traces of superseded components
  • some are not unnecessary for normal functioning but can compensate if the primary component breaks

Sydney Brenner , ‘Mathematics is the art of the perfect. Physics is the art of the optimal. Biology, because of evolution, is the art of the satisfactory.’

Lifeforms that survive natural selection persist because they work, not because they do things in the efficient or straightforward way.

Complexity and redundancy make the analysis of biological signalling networks and information flows challenging.

The Occam’s razor does not apply.

Nurse, Paul. What Is Life? Five Great Ideas in Biology. New York: W.W. Norton, 2021.

"Evolution, wasteful and haphazard as it is, has had three billion years in which to match organisms to their environments."

Ehrenfeld, David W. The Arrogance of Humanism. New York: Oxford University Press, 1978.

Evolution is ongoing, sometimes accelerated.

It always introduces change, destroys the old, destroys old forms of life, species, individuals, ecosystems.

There is no watchmaker, but there is no watch either. The evolution is wasteful, blundering, struggling. But it also results in abundant innovation and creativity (those two are always violent).

outcomes:

  • atavisms
  • inborn diseases and disorders
  • limitations on development
  • limitations on speciation
  • limitations on innovation and creativity, especially without major disasters
  • inherent satisficing, it is not possible and expensive to optimise, for example to collect and then process too much information; all organisms are the worst viable solutions rather than optimal ones
  • all organisms/species are also behind the times in reference to their changing circumstances, playing the catch-up
  • in many cases sexual selection is extravagant, costly, and excessive, wasting resources and harming individuals
  • stages of life, structures, all types of things might be invisible to evolution and thus not optimised or made meaningful at all; they can be random or lead by self-emerging but meaningless trends
  • wasteful, for example, very complex DNA in plants or multiple repeating genes
  • opportunistic, using what is at hand

Weber, Andreas. ‘The Economy of Wastefulness: The Biology of the Commons’. In The Wealth of the Commons: A World Beyond Market and State, edited by David Bollier and Silke Helfrich. Amherst: Levellers Press, 2012.

Properties of Nature

Misuse. Darwin on structurally similar creatures having very different habits in nature. Woodpeckers with no trees and geese that never swim.

Opportunism and the lack of optimality. Many organs are used for more than one function in some species as the process is still in transition. Some organs get completely repurposed like bladder in fishes into lungs (Darwin) As an example of opportunism. So our food can fall into lungs by mistake. In insects organs for respiration were converted into the organs for flight.

Redundancy (we can see this as a negative and a positive). Nature is redundant in that it produces multiple solutions for the same problem. Eg pollination in plants. No solution is optimal and they are in competition. Darwin

Greed. The purpose of all living creatures is to multiply to occupy all liveable space. So nature is greedy. Darwin.

Lack of Innovation. Nature is Prodigal in Variety, though Niggard in Innovation. Henri Milne-Edwards Both of these naturalists were struck by the lack of dramatic innovation in the evolution of living things, and the preponderance of minimal variation and refinement of traits across species and time.

Natura non facit saltum nature does not jump

Actually, it is not true that nature does not jump. Consider the puncture equilibrium theory, consider horizontal gene transfer and rapid development of antibiotic resistance, consider the jump from prokaryotes to eukaryotes with their mitochondria, etc. Ribosome as an invasive organism in endosymbiosis.

Wastefulness. Modifications of structure can be useful to organisms or their progenitors and thus wasteful. Darwin in the chapter on difficulties.

Out of date. Many structures have no direct relationship to the current habits of life. Darwin.

Beauty. Sense of beauty (read: arbitrary preferences). Darwin. Similar sense of beauty runs through the whole of animal kingdom. Butterflies, birds sexual reproduction.

Satisficing at the local level. Darwin. Natural selection will never produce absolute perfection. Just enough to be on part with the local context.

Lack of perfection. If our reason leads us to admire with enthusiasm a multitude of inimitable contrivances in nature, this same reason tells us, though we may easily err on both sides, that some other contrivances are less perfect.

Contradictions and the lack of harmony. One might say that nature has taken delight in accumulating contradictions in order to remove all foundation from the theory of a pre-existing harmony between the external and internal worlds. Helmholtz in Darwin

More on satisficing. Nature tends only to make each organic being as perfect as, or slightly more perfect than, the other inhabitants of the same country with which it comes into competition.

Wilderness. Darwin defines wildness as the fear of men. Big birds are wilder because they have been hunted more.

Darwin: uniform conditions of life are detrimental to any species. So, how can people preserve species via conservation?

Extinction. Permanence of extinction. Darwin: when a group disappears it does not reappear for the line of descent has been broken.

Darwin. Most recent forms are also the most improved. Really? What about interruptions in the cone? But if so, do people want to stop the evolution? Is this possible? How? Can only parts of be stopped? Especially as under special circumstances the changes are very quick. In artificial breeding a couple of generations of breeders makes for a strong change. In unconscious breeding some hundreds of years. Natural evolution is slower but what of it remains natural? Also, as conditions change would not the vectors of improvement also change possibly pointing into the opposite directions to those from before in some, possibly rare, cases. Also, looking at how easily some species become very problematic pests in new locations, maybe these are not that much improvements but idiosyncrasies responding to the local conditions? Darwin says that the species from the areas with more competition will likely to dominate because more improved, like from large continents etc.

Darwin. Atavistic or vestigial appendages. Hooks on seeds of plants living on the islands with no mammals. Shrivelled wings of some insular beetles. "For instance, in certain islands not tenanted by mammals, some of the endemic plants have beautifully hooked seeds; yet few relations are more striking than the adaptation of hooked seeds for transportal by the wool and fur of quadrupeds. This case presents no difficulty on my view, for a hooked seed might be transported to an island by some other means; and the plant then becoming slightly modified, but still retaining its hooked seeds, would form an endemic species, having as useless an appendage as any rudimentary organ, for instance, as the shrivelled wings under the soldered elytra of many insular beetles." Rudimentary atrophied

Rudimentary, Atrophied, and Aborted Organs

Darwin "ORGANS or parts in this strange condition, bearing the plain stamp of inutility, are extremely common, or even general, throughout nature. It would be impossible to name one of the higher animals in which some part or other is not in a rudimentary condition. In the mammalia, for instance, the males possess rudimentary mammæ; in snakes one lobe of the lungs is rudimentary; in birds the “bastard-wing” may safely be considered as a rudimentary digit, and in some species the whole wing is so far rudimentary that it cannot be used for flight. What can be more curious than the presence of teeth in fœtal whales, which when grown up have not a tooth in their heads; or the teeth, which never cut through the gums, in the upper jaws of unborn calves?"

Mundanity. No need to wonder at imperfections. Darwin. The current moment is unlikely to be unique in history. So, how can we presume that it is the perfect balance?

Impermanence. Darwin on distant futurity. "Judging from the past, we may safely infer that not one living species will transmit its unaltered likeness to a distant futurity. And of the species now living very few will transmit progeny of any kind to a far distant futurity; for the manner in which all organic beings are grouped, shows that the greater number of species of each genus, and all the species of many genera, have left no descendants, but have become utterly extinct. We can so far take a prophetic glance into futurity as to foretell that it will be the common and widely-spread species, belonging to the larger and dominant groups within each class, which will ultimately prevail and procreate new and dominant species. As all the living forms of life are the lineal descendants of those which lived long before the Silurian epoch, we may feel certain that the ordinary succession by generation has never once been broken, and that no cataclysm has desolated the whole world. Hence we may look with some confidence to a secure future of equally inappreciable length."


The life on Earth seems opposite to the idea of Gaia, all extinctions appear to be self-induced, according to the current state of evidence, even the meteor that killed the dinosaurs seems to have struck an already struggling ecosystem. Thus, life is tinkering and inventive but not self-supporting or self-regulating. With time it can recover and fill in the opportunity spaces. However, with losses, inefficiencies, etc.

Bjornerud, Marcia. Timefulness: How Thinking Like a Geologist Can Help Save the World. Princeton: Princeton University Press, 2018.

  • Understanding of nonhuman technologies allows alignment with natural lifecycles and, therefore, opens potential for better, more systematic lifecycle management. However, it is again important to note that many natural systems are very wasteful, based on excess.

Issues

Satisficing

From Good Enough

Future as the safety net of humanity

Mathematics as the study of perfect, physics as the study of optimal, biology as the study of minimally sufficient

Look up Gould and Panglossian when criticising natural selection

On the breeding of greyhounds: I breed many and I hang many.

Nature fights novelty. Never change what already works. So this is the importance of baselines.

Stagnation is good and change is bad in nature. Gould and Dawkins both agree.

Chance, waste, and stagnation are the properties in nature.

Biology is a science of relative frequencies

Free lunch and idleness in nature. Excellence as the outcome of excess as it is suicidal in nature because of diminishing returns.